Optimizing the journey from raw fecal sample to publication-ready data.
In microbiome research, the journey from a raw fecal sample to publication-ready sequencing and SCFA data is full of variables. If your sample prep is not standardized, or your bioinformatics handoff is just a wall of raw text, your study loses momentum.
At Microbiome Insights, we have built a CAP-accredited, end-to-end pipeline designed to take the guesswork out of both human and animal research.
Here is exactly how we collaborate with your team:
🔄 1. Free Pre-Study Consultation: Before a single sample is shipped, our scientific team meets with you to optimize sample handling, study design, sample size, power calculations, and sequencing depth.
🚚 2. Flexible Intake & Logistics: Send us what fits your workflow—raw whole stool (min. 50mg), rodent pellets (3–5 per animal), dry swabs, stabilized samples or even extracted DNA. We handle the international customs and courier logistics.
🤖 3. Validated, Automated Processing: Samples are extracted in our CAP-accredited laboratory using the Macherey-Nagel NucleoMag DNA Microbiome Kit on automated ThermoFisher KingFisher robots. We include an explicit mechanical bead-beating step to guarantee uniform recovery of tough, thick-walled microbes.
📊 4. Multi-Omic Profiling: We seamlessly pair your high-precision Gas Chromatography with Flame Ionization Detection (GC-FID) SCFA metabolite data with 16S amplicon or Shotgun Metagenomic sequencing (MiSeq/NovaSeq architectures)
🧠 5. Free Post-Report Review: After delivering your quality control sequencing files, processed tables and a project-specific report with high quality editable figures, our bioinformatics team meets with you to interpret statistical trends and review graphs for your next abstract or journal submission.