Associate Prof @MITChemE ; mom^4 + wife; enjoys building cell-fate circuits, exploring dna topology, reprogramming the living world, and soccer; soli gloria deo

Could the folding of synthetic gene circuits in 3D shape how genes are expressed? Today @ScienceMagazine we report on the role of gene syntax in shaping feedback between transcriptional activity and genome folding for advanced circuit design🧵 (1/n)
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Katie Galloway retweeted
We are excited to announce a new faculty position in AI for Biology at UC Berkeley, jointly between @Berkeley_EECS and @CCBBerkeley. Please repost & share this opportunity with outstanding early-career researchers in your networks. Apply by Nov 9, 2026: aprecruit.berkeley.edu/JPF05…
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Katie Galloway retweeted
We're searching for an assistant/associate professor in Bioengineering at Stanford! If you're using cutting-edge engineering approaches to understand or control biological systems in useful ways (medical, environmental, etc), we'd love to hear from you! facultypositions.stanford.ed…
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Oh transgene silencing, how do I fix thee? Let me count the ways! Nifty new way of addressing transgene silencing!
Happy to share the revised and now published in Cell Systems version of our paper, where we explore why dCas9-KRAB(KOX1) protein levels drop so drastically after neuronal differentiation in WTC11 and KOL2.1J iPSC lines. Paper: doi.org/10.1016/j.cels.2026.…
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Katie Galloway retweeted
🌴 Present your research at Winter qBio 2027! 🧬 We're accepting abstracts for contributed talks and poster presentations, due November 20th 🎤📊 Submit → w-qbio.org/present
Made with AI
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Katie Galloway retweeted
The University of California was for so long a transformative force for social mobility because it had the highest standards and inspired people from all walks of California to aspire to them. Dumping the SAT, whatever you think of the motivations for doing so, was a retreat from this role, and has had cascading disastrous effects on secondary education in the state. Reinstating it will not solve all of these problems, but it is an absolutely essential first step.
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Thrilled to announce that the Savinov lab is now live at @UTAustin! Our lab @UT_MBS employs massively parallel experimental and AI methods to discover and design protein fragments as universal regulators of protein interactions in health and disease. savinovlab.com/ (1/n)
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Katie Galloway retweeted
Stanford Bioengineering faculty search: Apply by Sept 30! Bioengineering is defined broadly: if you are engineering at the level of biomolecules, cells, tissues, organisms, or using/developing advanced engineering techniques to study these systems - please apply! facultypositions.stanford.ed…
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the thrill of updating the cover of the TPS report...

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Neat work from @Rotem_Shalita and @IdoAmitLab! Congrats!
Findings define a CNS-localized adaptive immune circuit 🛡️ in #MultipleSclerosis and nominate programmable PD-1 #CART cells as a strategy to disrupt it. Learn more: bit.ly/3VqUVpG | @CellPressNews
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Heading across the river tomorrow for the Harvard Systems Biology Seminar at noon. I'll definitely discuss this paper and some nifty unpublished things. hope to see folks there! @harvardmed @HMS_SynBioHIVE @HMS_SysBio @baym @NoahOlsman
Could the folding of synthetic gene circuits in 3D shape how genes are expressed? Today @ScienceMagazine we report on the role of gene syntax in shaping feedback between transcriptional activity and genome folding for advanced circuit design🧵 (1/n)
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Nice work @philippe_batut ! This looks like eRNA priming with the upstream dominance we observed We mapped this effect to supercoiling-mediated repression of the downstream gene. When the upstream gene turns off, then you can activate the downstream gene. Thread below.
Replying to @philippe_batut
4/ To peer into the interplay between enhancer and gene, we co-visualized eRNA and mRNA transcription in cis. We find that gene activation coincides with a drop in enhancer transcription and that optimal gene activation seems to be achieved at low levels of enhancer activity
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Could the folding of synthetic gene circuits in 3D shape how genes are expressed? Today @ScienceMagazine we report on the role of gene syntax in shaping feedback between transcriptional activity and genome folding for advanced circuit design🧵 (1/n)
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Let's roll
I reread this every year. I cry like a baby every year. Todd Beamer died a father, husband, and hero. Todd: Hello… Operator… listen to me. I can’t speak very loud. This is an emergency. I’m a passenger on a United flight to San Francisco. Our plane has been hijacked. Lisa: I understand. Can they see you? Todd: No. There are three that we know of. They have knives — razor knives, like box cutters. Someone announced from the cockpit there was a bomb. It sounded fake. Lisa: Your name?Todd: Todd Beamer. United Flight 93.Todd: They killed one passenger in first class. They forced most of us back. Fourteen of us here. Five flight attendants. The guy with the bomb ordered us to sit on the floor. Lisa: Are you okay? Todd: We’re going down… wait. No. We’re leveling off. We changed directions. We’re flying east again. Todd: A guy named Jeremy called his wife. She told him two planes hit the World Trade Center. Lisa, is that true? Lisa: I have to tell you the truth. It’s very bad. Both towers are gone. A third plane hit the Pentagon. Our country is under attack. I’m afraid your plane may be part of their plan. Todd: Oh God. Lisa, will you do something for me? Call my wife and my kids. Promise me you’ll call. Lisa: I promise. Todd: Our home number is… You have the same name as my wife. Lisa. We’ve been married ten years. She’s pregnant with our third child. Tell her I love her. I’ll always love her. We have two boys — David, he’s 3, and Andrew, he’s 1. Tell them their daddy loves them and he is so proud of them. The baby is due January 12th. I saw an ultrasound. We still don’t know if it’s a girl or a boy. Lisa: I’ll tell them. I promise, Todd.(Lisa patches in the FBI.) Agent: Todd, your plane is on a course for Washington. Best guess is the White House or the Capitol. Todd: I understand. I’ll be back. Todd: Everyone knows this isn’t a normal hijacking. We have decided we will not be pawns in their plot. Lisa: What are you going to do? Todd: Four of us are going to rush the one with the bomb. Then the cockpit. A stewardess is getting boiling water. We’ll take them out. Todd: Would you pray with me?They pray the Lord’s Prayer. Then: Yea, though I walk through the valley of the shadow of death, I will fear no evil, for thou art with me. Todd: God help me. Jesus help me.Are you guys ready? Let’s Roll.
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Katie Galloway retweeted
📢 Our Dept. of Systems Biology @Columbia has a faculty opening in the broad area of quantitative biology (Comp/AI/Bio, etc.). Come join our department in NYC! Please circulate/RT. Apply: apply.interfolio.com/192256 Deadline: Nov 1, 2026. @ColumbiaSysBio systemsbiology.columbia.edu/…
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Katie Galloway retweeted
Is euchromatin really “open”? 🧬 Using super-resolution imaging🔬 our new study @NatureGenet reveals: Euchromatin forms condensed domains in live cells. Cohesin constrains them and prevents domain mixing for proper transcriptional insulation🚧 🔗nature.com/articles/s41588-0… (1/2)
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Katie Galloway retweeted
The MoTrPAC consortium has been studying the molecular effects of exercise. In a new paper with Conrad Oakes, we take a careful look at their rat dataset, leading to discoveries that highlight the importance of proper bioinformatics & stats. 1/ link.springer.com/article/10…
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Starting my 8th year at MIT and this echoes as true as ever but perhaps louder
Perhaps the greatest challenge in growing up is to see the world as it really is and yet not grow cynical or weary; to retain courage and hope, no matter what looms on the horizon.
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Katie Galloway retweeted
lol
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This 'important' Tools and Resources paper establishes a robust live-imaging toolkit to characterize excitatory and inhibitory synaptic dynamics during neuronal development. The methodology and quantitative data are 'convincing' and well validated. elifesciences.org/articles/1…
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them: can you serve on Saturday panel on "work/life balance" me: ummm

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